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Slot: description

URI: lambda:description Alias: description

Applicable Classes

Name Description Modifies Slot
FTIRImage Fourier Transform Infrared (FTIR) spectroscopy image capturing molecular comp... no
DatabaseCrossReference Cross-references to external databases no
FluorescenceImage Fluorescence microscopy image capturing specific molecular targets through fl... no
StructuralFeature Structural features and properties of protein regions no
SANSDetector Description of a detector used in a SANS instrument no
MeasurementConditions Conditions under which biophysical measurements were made no
FSCCurve Fourier Shell Correlation curve data no
Image3D A 3D volume or tomogram no
XRayPreparation X-ray crystallography specific preparation no
XRFImage X-ray fluorescence (XRF) image showing elemental distribution no
SAXSPreparation SAXS/WAXS specific preparation no
RefinementParameters Parameters specific to 3D refinement workflows no
MutationEffect Effects of mutations and variants on protein structure and function no
CryoEMPreparation Cryo-EM specific sample preparation no
ProteinProteinInteraction Protein-protein interactions and interfaces no
XRayInstrument X-ray diffractometer or synchrotron beamline specifications no
Sample A biological sample used in structural biology experiments no
BeamCenterPixels Combined beam center coordinates in detector pixel units no
ProteinAnnotation Base class for all protein-related functional and structural annotations no
SANSConfiguration Experimental configuration for a SANS instrument no
Movie Raw cryo-EM movie with frame-by-frame metadata for motion correction no
TechniqueSpecificPreparation Base class for technique-specific preparation details no
CryoEMInstrument Cryo-EM microscope specifications no
DataFile A data file generated or used in the study no
Image An image file from structural biology experiments no
AggregatedProteinView Aggregated view of all structural and functional data for a protein no
OntologyTerm A term from a controlled vocabulary or ontology no
ConformationalState Individual conformational state no
OpticalImage Visible light optical microscopy or photography image no
ImageFeature Semantic annotations describing features identified in images using controlle... no
ConformationalEnsemble Ensemble of conformational states for a protein no
ExperimentRun An experimental data collection session no
PostTranslationalModification Post-translational modifications observed or predicted no
Dataset Root container holding flat entity collections and association tables no
ExperimentalConditions Environmental and experimental conditions no
CTFEstimationParameters Parameters specific to CTF estimation workflows no
EvolutionaryConservation Evolutionary conservation information no
Instrument An instrument used to collect data no
Image2D A 2D image (micrograph, diffraction pattern) no
MolecularComposition Molecular composition of a sample no
ComputeResources Computational resources used no
Study A logical grouping of related experiments investigating a research question no
ParticlePickingParameters Parameters specific to particle picking workflows no
SANSInstrument Small-angle neutron scattering (SANS) instrument specifications no
Micrograph Motion-corrected micrograph derived from movie no
SAXSInstrument SAXS/WAXS instrument specifications no
AttributeGroup A grouping of related data attributes that form a logical unit no
LigandInteraction Small molecule/ligand interactions with proteins no
CrystallizationConditions Crystal growth conditions for X-ray crystallography (NSLS2 Crystallization ma... no
QualityMetrics Quality metrics for experiments no
NamedThing A named thing no
ProteinConstruct Detailed information about a protein construct including cloning and sequence... no
WorkflowRun A computational processing workflow execution no
MotionCorrectionParameters Parameters specific to motion correction workflows no
FunctionalSite Functional sites including catalytic, binding, and regulatory sites no
SANSSource Beam source parameters for a SANS instrument no
StorageConditions Storage conditions for samples no
BeamlineInstrument Multi-technique synchrotron beamline that supports multiple experimental meth... no
BiophysicalProperty Measured or calculated biophysical properties no
DataCollectionStrategy Strategy for data collection no
SamplePreparation A process that prepares a sample for imaging no
BufferComposition Buffer composition for sample storage no

Properties

Identifier and Mapping Information

Mappings

Mapping Type Mapped Value
self lambda:description
native lambda:description

LinkML Source

name: description
alias: description
domain_of:
- NamedThing
- AttributeGroup
range: string