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Slot: sequence_accession

Accession of the reference nucleotide sequence as a CURIE: RefSeq (refseq:NM_000518.5) or INSDC, which covers GenBank, ENA and DDBJ (insdc:J00153.1). For transcripts, genes and genomic fragments; a synthetic oligonucleotide has none.

URI: lambda:sequence_accession Alias: sequence_accession

Applicable Classes

Name Description Modifies Slot
NucleicAcid A nucleic acid as a molecular entity: one DNA, RNA or hybrid strand, with its... no

Properties

  • Range: Uriorcurie

  • Regex pattern: ^(refseq|insdc):[A-Z][A-Z0-9_]*[0-9](\.[0-9]+)?$

Identifier and Mapping Information

Schema Source

  • from schema: http://w3id.org/lambda/

Mappings

Mapping Type Mapped Value
self lambda:sequence_accession
native lambda:sequence_accession
exact mmCIF:_struct_ref.pdbx_db_accession

LinkML Source

name: sequence_accession
description: 'Accession of the reference nucleotide sequence as a CURIE: RefSeq (refseq:NM_000518.5)
  or INSDC, which covers GenBank, ENA and DDBJ (insdc:J00153.1). For transcripts,
  genes and genomic fragments; a synthetic oligonucleotide has none.'
from_schema: http://w3id.org/lambda/
exact_mappings:
- mmCIF:_struct_ref.pdbx_db_accession
rank: 1000
alias: sequence_accession
owner: NucleicAcid
domain_of:
- NucleicAcid
range: uriorcurie
pattern: ^(refseq|insdc):[A-Z][A-Z0-9_]*[0-9](\.[0-9]+)?$