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Slot: publication_ids

IDs of one or more publications supporting this annotation. Use PubMed IDs in the format 'PMID:XXXXXXX' or DOIs with 'DOI:' prefix.

URI: lambda:publication_ids Alias: publication_ids

Applicable Classes

Name Description Modifies Slot
ProteinProteinInteraction Protein-protein interactions and interfaces no
MutationEffect Effects of mutations and variants on protein structure and function no
FunctionalSite Functional sites including catalytic, binding, and regulatory sites no
EvolutionaryConservation Evolutionary conservation information no
StructuralFeature Structural features and properties of protein regions no
PostTranslationalModification Post-translational modifications observed or predicted no
ProteinAnnotation Base class for all protein-related functional and structural annotations no

Properties

  • Range: String

  • Multivalued: True

  • Regex pattern: ^(PMID:[0-9]+|DOI:10\.[0-9]{4,}/[-._;()/:A-Za-z0-9]+)$

Identifier and Mapping Information

Schema Source

  • from schema: http://w3id.org/lambda/

Mappings

Mapping Type Mapped Value
self lambda:publication_ids
native lambda:publication_ids

LinkML Source

name: publication_ids
description: IDs of one or more publications supporting this annotation. Use PubMed
  IDs in the format 'PMID:XXXXXXX' or DOIs with 'DOI:' prefix.
from_schema: http://w3id.org/lambda/
rank: 1000
alias: publication_ids
owner: ProteinAnnotation
domain_of:
- ProteinAnnotation
range: string
multivalued: true
pattern: ^(PMID:[0-9]+|DOI:10\.[0-9]{4,}/[-._;()/:A-Za-z0-9]+)$