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Slot: publication_ids

IDs of one or more publications supporting this annotation. Use PubMed IDs in the format 'PMID:XXXXXXX' or DOIs with 'DOI:' prefix.

URI: lambdaber:publication_ids Alias: publication_ids

Applicable Classes

Name Description Modifies Slot
ProteinAnnotation Base class for all protein-related functional and structural annotations no
MutationEffect Effects of mutations and variants on protein structure and function no
ProteinProteinInteraction Protein-protein interactions and interfaces no
StructuralFeature Structural features and properties of protein regions no
EvolutionaryConservation Evolutionary conservation information no
PostTranslationalModification Post-translational modifications observed or predicted no
FunctionalSite Functional sites including catalytic, binding, and regulatory sites no

Properties

  • Range: String

  • Multivalued: True

  • Regex pattern: ^(PMID:[0-9]+|DOI:10\.[0-9]{4,}/[-._;()/:A-Za-z0-9]+)$

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/lambda-ber-schema/

Mappings

Mapping Type Mapped Value
self lambdaber:publication_ids
native lambdaber:publication_ids

LinkML Source

name: publication_ids
description: IDs of one or more publications supporting this annotation. Use PubMed
  IDs in the format 'PMID:XXXXXXX' or DOIs with 'DOI:' prefix.
from_schema: https://w3id.org/lambda-ber-schema/
rank: 1000
alias: publication_ids
owner: ProteinAnnotation
domain_of:
- ProteinAnnotation
range: string
multivalued: true
pattern: ^(PMID:[0-9]+|DOI:10\.[0-9]{4,}/[-._;()/:A-Za-z0-9]+)$