Slot: amino_acid_sequence
Canonical one-letter amino acid sequence of the protein, without tags or other construct additions. Construct-level sequence belongs on ProteinConstruct.
URI: lambda:amino_acid_sequence Alias: amino_acid_sequence
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Protein | A protein as a biological entity: its sequence, source organism, gene, and th... | no |
Properties
-
Range: String
-
Regex pattern:
^[ACDEFGHIKLMNPQRSTVWYBJOUXZ]+$
Identifier and Mapping Information
Schema Source
- from schema: http://w3id.org/lambda/
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | lambda:amino_acid_sequence |
| native | lambda:amino_acid_sequence |
| exact | mmCIF:_entity_poly.pdbx_seq_one_letter_code_can |
LinkML Source
name: amino_acid_sequence
description: Canonical one-letter amino acid sequence of the protein, without tags
or other construct additions. Construct-level sequence belongs on ProteinConstruct.
from_schema: http://w3id.org/lambda/
exact_mappings:
- mmCIF:_entity_poly.pdbx_seq_one_letter_code_can
rank: 1000
alias: amino_acid_sequence
owner: Protein
domain_of:
- Protein
range: string
pattern: ^[ACDEFGHIKLMNPQRSTVWYBJOUXZ]+$