Skip to content

Class: OntologyTerm

A term from a controlled vocabulary or ontology

URI: lambdaber:OntologyTerm

classDiagram class OntologyTerm click OntologyTerm href "../OntologyTerm/" NamedThing <|-- OntologyTerm click NamedThing href "../NamedThing/" OntologyTerm : definition OntologyTerm : description OntologyTerm : id OntologyTerm : label OntologyTerm : ontology OntologyTerm : terms OntologyTerm --> "*" OntologyTerm : terms click OntologyTerm href "../OntologyTerm/" OntologyTerm : title

Inheritance

Slots

Name Cardinality and Range Description Inheritance
terms *
OntologyTerm		 Collection of ontology terms direct
label 0..1
String		 The human-readable label or name of the ontology term direct
definition 0..1
String		 The formal definition or meaning of the ontology term direct
ontology 0..1
String		 The ontology or controlled vocabulary this term comes from (e direct
id 1
Uriorcurie		 Globally unique identifier as an IRI or CURIE for machine processing and exte... NamedThing
title 0..1
String		 A human-readable name or title for this entity NamedThing
description 0..1
String		 A detailed textual description of this entity NamedThing

Usages

used by used in type used
Sample organism range OntologyTerm
Sample anatomy range OntologyTerm
Sample cell_type range OntologyTerm
ImageFeature terms range OntologyTerm
OntologyTerm terms range OntologyTerm

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/lambda-ber-schema/

Mappings

Mapping Type Mapped Value
self lambdaber:OntologyTerm
native lambdaber:OntologyTerm

LinkML Source

Direct

name: OntologyTerm
description: A term from a controlled vocabulary or ontology
from_schema: https://w3id.org/lambda-ber-schema/
is_a: NamedThing
attributes:
  terms:
    name: terms
    description: Collection of ontology terms
    from_schema: https://w3id.org/lambda-ber-schema/
    domain_of:
    - ImageFeature
    - OntologyTerm
    range: OntologyTerm
    multivalued: true
    inlined: true
    inlined_as_list: true
  label:
    name: label
    description: The human-readable label or name of the ontology term
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - OntologyTerm
    range: string
  definition:
    name: definition
    description: The formal definition or meaning of the ontology term
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - OntologyTerm
    range: string
  ontology:
    name: ontology
    description: The ontology or controlled vocabulary this term comes from (e.g.,
      GO, SO, UBERON)
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - OntologyTerm
    range: string

Induced

name: OntologyTerm
description: A term from a controlled vocabulary or ontology
from_schema: https://w3id.org/lambda-ber-schema/
is_a: NamedThing
attributes:
  terms:
    name: terms
    description: Collection of ontology terms
    from_schema: https://w3id.org/lambda-ber-schema/
    alias: terms
    owner: OntologyTerm
    domain_of:
    - ImageFeature
    - OntologyTerm
    range: OntologyTerm
    multivalued: true
    inlined: true
    inlined_as_list: true
  label:
    name: label
    description: The human-readable label or name of the ontology term
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: label
    owner: OntologyTerm
    domain_of:
    - OntologyTerm
    range: string
  definition:
    name: definition
    description: The formal definition or meaning of the ontology term
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: definition
    owner: OntologyTerm
    domain_of:
    - OntologyTerm
    range: string
  ontology:
    name: ontology
    description: The ontology or controlled vocabulary this term comes from (e.g.,
      GO, SO, UBERON)
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: ontology
    owner: OntologyTerm
    domain_of:
    - OntologyTerm
    range: string
  id:
    name: id
    description: Globally unique identifier as an IRI or CURIE for machine processing
      and external references. Used for linking data across systems and semantic web
      integration.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    identifier: true
    alias: id
    owner: OntologyTerm
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  title:
    name: title
    description: A human-readable name or title for this entity
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    slot_uri: dcterms:title
    alias: title
    owner: OntologyTerm
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A detailed textual description of this entity
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: description
    owner: OntologyTerm
    domain_of:
    - NamedThing
    - AttributeGroup
    range: string