Enum: FileFormatEnum

File formats

Permissible Values

Value	Meaning	Description
mrc	None	MRC format for EM data
tiff	None	TIFF image format
hdf5	None	HDF5 hierarchical data format
star	None	STAR format for metadata
pdb	None	PDB coordinate format
mmcif	None	mmCIF format
mtz	None	MTZ reflection format
cbf	None	Crystallographic Binary Format
cbf_zst	None	Zstandard-compressed CBF format
img	None	Generic diffraction image format
h5	None	HDF5 format (alternative extension)
ascii	None	ASCII text format
thermo_raw	None	Thermo Fisher RAW format
zip	None	ZIP compressed archive
mrcs	None	MRC stack format for particle stacks
eer	None	EER format for electron counting
cs	None	CryoSPARC format
json	None	JSON data format
csv	None	Comma-separated values format
ccp4	None	CCP4 map format
gz	None	Gzip compressed format

Slots

Name	Description
file_format	File format

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/lambda-ber-schema/

LinkML Source

name: FileFormatEnum
description: File formats
from_schema: https://w3id.org/lambda-ber-schema/
rank: 1000
permissible_values:
  mrc:
    text: mrc
    description: MRC format for EM data
  tiff:
    text: tiff
    description: TIFF image format
  hdf5:
    text: hdf5
    description: HDF5 hierarchical data format
  star:
    text: star
    description: STAR format for metadata
  pdb:
    text: pdb
    description: PDB coordinate format
  mmcif:
    text: mmcif
    description: mmCIF format
  mtz:
    text: mtz
    description: MTZ reflection format
  cbf:
    text: cbf
    description: Crystallographic Binary Format
  cbf_zst:
    text: cbf_zst
    description: Zstandard-compressed CBF format
  img:
    text: img
    description: Generic diffraction image format
  h5:
    text: h5
    description: HDF5 format (alternative extension)
  ascii:
    text: ascii
    description: ASCII text format
  thermo_raw:
    text: thermo_raw
    description: Thermo Fisher RAW format
  zip:
    text: zip
    description: ZIP compressed archive
  mrcs:
    text: mrcs
    description: MRC stack format for particle stacks
  eer:
    text: eer
    description: EER format for electron counting
  cs:
    text: cs
    description: CryoSPARC format
  json:
    text: json
    description: JSON data format
  csv:
    text: csv
    description: Comma-separated values format
  ccp4:
    text: ccp4
    description: CCP4 map format
  gz:
    text: gz
    description: Gzip compressed format