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Class: FTIRImage

Fourier Transform Infrared (FTIR) spectroscopy image capturing molecular composition through vibrational spectroscopy

URI: lambdaber:FTIRImage

classDiagram class FTIRImage click FTIRImage href "../FTIRImage/" Image <|-- FTIRImage click Image href "../Image/" FTIRImage : acquisition_date FTIRImage : apodization_function FTIRImage : background_correction FTIRImage : description FTIRImage : dimensions_x FTIRImage --> "0..1" QuantityValue : dimensions_x click QuantityValue href "../QuantityValue/" FTIRImage : dimensions_y FTIRImage --> "0..1" QuantityValue : dimensions_y click QuantityValue href "../QuantityValue/" FTIRImage : dose FTIRImage --> "0..1" QuantityValue : dose click QuantityValue href "../QuantityValue/" FTIRImage : exposure_time FTIRImage --> "0..1" QuantityValue : exposure_time click QuantityValue href "../QuantityValue/" FTIRImage : file_name FTIRImage : id FTIRImage : molecular_signatures FTIRImage : number_of_scans FTIRImage --> "0..1" QuantityValue : number_of_scans click QuantityValue href "../QuantityValue/" FTIRImage : pixel_size FTIRImage --> "0..1" QuantityValue : pixel_size click QuantityValue href "../QuantityValue/" FTIRImage : spectral_resolution FTIRImage --> "0..1" QuantityValue : spectral_resolution click QuantityValue href "../QuantityValue/" FTIRImage : title FTIRImage : wavenumber_max FTIRImage --> "0..1" QuantityValue : wavenumber_max click QuantityValue href "../QuantityValue/" FTIRImage : wavenumber_min FTIRImage --> "0..1" QuantityValue : wavenumber_min click QuantityValue href "../QuantityValue/"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
wavenumber_min 0..1
QuantityValue		 Minimum wavenumber, typically specified in inverse centimeters (cm⁻¹) direct
wavenumber_max 0..1
QuantityValue		 Maximum wavenumber, typically specified in inverse centimeters (cm⁻¹) direct
spectral_resolution 0..1
QuantityValue		 Spectral resolution, typically specified in inverse centimeters (cm⁻¹) direct
number_of_scans 0..1
QuantityValue		 Number of scans averaged for the spectrum direct
apodization_function 0..1
String		 Mathematical function used for apodization direct
molecular_signatures *
String		 Identified molecular signatures or peaks direct
background_correction 0..1
String		 Method used for background correction direct
file_name 1
String		 Image file name Image
acquisition_date 0..1
String		 Date image was acquired Image
pixel_size 0..1
QuantityValue		 Pixel size, typically specified in Angstroms Image
dimensions_x 0..1
QuantityValue		 Image width, typically specified in pixels Image
dimensions_y 0..1
QuantityValue		 Image height, typically specified in pixels Image
exposure_time 0..1
QuantityValue		 Exposure time, typically specified in seconds Image
dose 0..1
QuantityValue		 Electron dose in e-/Ų Image
id 1
Uriorcurie		 Globally unique identifier as an IRI or CURIE for machine processing and exte... NamedThing
title 0..1
String		 A human-readable name or title for this entity NamedThing
description 0..1
String		 A detailed textual description of this entity NamedThing

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/lambda-ber-schema/

Mappings

Mapping Type Mapped Value
self lambdaber:FTIRImage
native lambdaber:FTIRImage

LinkML Source

Direct

name: FTIRImage
description: Fourier Transform Infrared (FTIR) spectroscopy image capturing molecular
  composition through vibrational spectroscopy
from_schema: https://w3id.org/lambda-ber-schema/
is_a: Image
attributes:
  wavenumber_min:
    name: wavenumber_min
    description: Minimum wavenumber, typically specified in inverse centimeters (cm⁻¹).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  wavenumber_max:
    name: wavenumber_max
    description: Maximum wavenumber, typically specified in inverse centimeters (cm⁻¹).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  spectral_resolution:
    name: spectral_resolution
    description: Spectral resolution, typically specified in inverse centimeters (cm⁻¹).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  number_of_scans:
    name: number_of_scans
    description: Number of scans averaged for the spectrum
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  apodization_function:
    name: apodization_function
    description: Mathematical function used for apodization
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - FTIRImage
    range: string
  molecular_signatures:
    name: molecular_signatures
    description: Identified molecular signatures or peaks
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - FTIRImage
    range: string
    multivalued: true
  background_correction:
    name: background_correction
    description: Method used for background correction
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - FTIRImage
    range: string

Induced

name: FTIRImage
description: Fourier Transform Infrared (FTIR) spectroscopy image capturing molecular
  composition through vibrational spectroscopy
from_schema: https://w3id.org/lambda-ber-schema/
is_a: Image
attributes:
  wavenumber_min:
    name: wavenumber_min
    description: Minimum wavenumber, typically specified in inverse centimeters (cm⁻¹).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: wavenumber_min
    owner: FTIRImage
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  wavenumber_max:
    name: wavenumber_max
    description: Maximum wavenumber, typically specified in inverse centimeters (cm⁻¹).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: wavenumber_max
    owner: FTIRImage
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  spectral_resolution:
    name: spectral_resolution
    description: Spectral resolution, typically specified in inverse centimeters (cm⁻¹).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: spectral_resolution
    owner: FTIRImage
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  number_of_scans:
    name: number_of_scans
    description: Number of scans averaged for the spectrum
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: number_of_scans
    owner: FTIRImage
    domain_of:
    - FTIRImage
    range: QuantityValue
    inlined: true
  apodization_function:
    name: apodization_function
    description: Mathematical function used for apodization
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: apodization_function
    owner: FTIRImage
    domain_of:
    - FTIRImage
    range: string
  molecular_signatures:
    name: molecular_signatures
    description: Identified molecular signatures or peaks
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: molecular_signatures
    owner: FTIRImage
    domain_of:
    - FTIRImage
    range: string
    multivalued: true
  background_correction:
    name: background_correction
    description: Method used for background correction
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: background_correction
    owner: FTIRImage
    domain_of:
    - FTIRImage
    range: string
  file_name:
    name: file_name
    description: Image file name
    from_schema: https://w3id.org/lambda-ber-schema/
    alias: file_name
    owner: FTIRImage
    domain_of:
    - DataFile
    - Image
    range: string
    required: true
  acquisition_date:
    name: acquisition_date
    description: Date image was acquired
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: acquisition_date
    owner: FTIRImage
    domain_of:
    - Image
    range: string
  pixel_size:
    name: pixel_size
    description: Pixel size, typically specified in Angstroms. Data providers may
      specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: pixel_size
    owner: FTIRImage
    domain_of:
    - Image
    - RefinementParameters
    range: QuantityValue
    inlined: true
  dimensions_x:
    name: dimensions_x
    description: Image width, typically specified in pixels. Data providers may specify
      alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: dimensions_x
    owner: FTIRImage
    domain_of:
    - Image
    range: QuantityValue
    inlined: true
  dimensions_y:
    name: dimensions_y
    description: Image height, typically specified in pixels. Data providers may specify
      alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: dimensions_y
    owner: FTIRImage
    domain_of:
    - Image
    range: QuantityValue
    inlined: true
  exposure_time:
    name: exposure_time
    description: Exposure time, typically specified in seconds. Data providers may
      specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    alias: exposure_time
    owner: FTIRImage
    domain_of:
    - ExperimentRun
    - Image
    - ExperimentalConditions
    range: QuantityValue
    inlined: true
  dose:
    name: dose
    description: Electron dose in e-/Ų
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: dose
    owner: FTIRImage
    domain_of:
    - Image
    - Micrograph
    range: QuantityValue
    inlined: true
  id:
    name: id
    description: Globally unique identifier as an IRI or CURIE for machine processing
      and external references. Used for linking data across systems and semantic web
      integration.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    identifier: true
    alias: id
    owner: FTIRImage
    domain_of:
    - NamedThing
    - Attribute
    range: uriorcurie
    required: true
  title:
    name: title
    description: A human-readable name or title for this entity
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    slot_uri: dcterms:title
    alias: title
    owner: FTIRImage
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A detailed textual description of this entity
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: description
    owner: FTIRImage
    domain_of:
    - NamedThing
    - AttributeGroup
    range: string