Class: ExperimentRun

name: ExperimentRun
description: An experimental data collection session
from_schema: https://w3id.org/lambda-ber-schema/
is_a: NamedThing
attributes:
  experiment_code:
    name: experiment_code
    description: Human-friendly laboratory or facility identifier for the experiment
      (e.g., 'SIBYLS-2024-02-01-hetBGL', 'CRYOEM-RUN-240815-001'). Used for local
      tracking and cross-referencing within laboratory systems.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    required: true
  experiment_date:
    name: experiment_date
    description: Date of the experiment
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  operator_id:
    name: operator_id
    description: Identifier or name of the person who performed the experiment data
      collection (e.g., 'jsmith', 'John Smith', or personnel ID)
    from_schema: https://w3id.org/lambda-ber-schema/
    domain_of:
    - SamplePreparation
    - ExperimentRun
    range: string
  technique:
    name: technique
    description: Technique used for data collection
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: TechniqueEnum
    required: true
  experimental_method:
    name: experimental_method
    description: Specific experimental method for structure determination (particularly
      for diffraction techniques)
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    - BiophysicalProperty
    range: ExperimentalMethodEnum
  experimental_conditions:
    name: experimental_conditions
    description: Environmental and experimental conditions
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: ExperimentalConditions
  data_collection_strategy:
    name: data_collection_strategy
    description: Strategy for data collection
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: DataCollectionStrategy
  quality_metrics:
    name: quality_metrics
    description: Quality metrics for the experiment
    from_schema: https://w3id.org/lambda-ber-schema/
    domain_of:
    - Sample
    - ExperimentRun
    range: QualityMetrics
  raw_data_location:
    name: raw_data_location
    description: Location of raw data files
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
  processing_status:
    name: processing_status
    description: Current processing status
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: ProcessingStatusEnum
  daq_system:
    name: daq_system
    description: Data acquisition system used to collect this experiment
    from_schema: https://w3id.org/lambda-ber-schema/
    domain_of:
    - BeamlineInstrument
    - ExperimentRun
    range: DataAcquisitionSystemEnum
  magnification:
    name: magnification
    description: Magnification used during data collection
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    - OpticalImage
    range: QuantityValue
    inlined: true
  calibrated_pixel_size:
    name: calibrated_pixel_size
    description: Calibrated pixel size in Angstroms per pixel
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  camera_binning:
    name: camera_binning
    description: Camera binning factor. This must be a positive float value (e.g.,
      1, 1.5, 2, 3).
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  exposure_time_per_frame:
    name: exposure_time_per_frame
    description: Exposure time per frame in milliseconds
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  frames_per_movie:
    name: frames_per_movie
    description: Number of frames per movie
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  total_exposure_time:
    name: total_exposure_time
    description: Total exposure time in milliseconds
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  total_dose:
    name: total_dose
    description: Total electron dose in e-/Angstrom^2
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    - DataCollectionStrategy
    range: QuantityValue
    inlined: true
  dose_rate:
    name: dose_rate
    description: Dose rate in e-/pixel/s or e-/Angstrom^2/s
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_target:
    name: defocus_target
    description: Target defocus value in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_range_min:
    name: defocus_range_min
    description: Minimum defocus range in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_range_max:
    name: defocus_range_max
    description: Maximum defocus range in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_range_increment:
    name: defocus_range_increment
    description: Defocus range increment in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  astigmatism_target:
    name: astigmatism_target
    description: Target astigmatism in Angstroms
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  coma:
    name: coma
    description: Coma aberration in nanometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  stage_tilt:
    name: stage_tilt
    description: Stage tilt angle in degrees
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  autoloader_slot:
    name: autoloader_slot
    description: Autoloader slot identifier
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  shots_per_hole:
    name: shots_per_hole
    description: Number of shots taken per hole
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  holes_per_group:
    name: holes_per_group
    description: Number of holes per group. Data providers may include unit information
      in the QuantityValue if needed.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  acquisition_software:
    name: acquisition_software
    description: Acquisition software used (e.g., SerialEM, EPU, Leginon)
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  acquisition_software_version:
    name: acquisition_software_version
    description: Version of acquisition software
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  wavelength:
    name: wavelength
    description: X-ray wavelength, typically specified in Angstroms (Å). Data providers
      may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Wavelength
    - imgCIF:_diffrn_radiation_wavelength.wavelength
    - mmCIF:_diffrn_radiation_wavelength.wavelength
    - ispyb:DataCollection.wavelength
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  oscillation_angle:
    name: oscillation_angle
    description: Oscillation angle per image, typically specified in degrees. Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Angle_increment
    - imgCIF:_diffrn_scan_axis.angle_increment
    - mmCIF:_diffrn_scan.angle_increment
    - ispyb:DataCollection.axisRange
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  start_angle:
    name: start_angle
    description: Starting rotation angle, typically specified in degrees. Data providers
      may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Start_angle
    - imgCIF:_diffrn_scan_axis.angle_start
    - ispyb:DataCollection.axisStart
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  number_of_images:
    name: number_of_images
    description: Total number of diffraction images collected
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  beam_center_x:
    name: beam_center_x
    description: Beam center X coordinate, typically specified in pixels ([px]). Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Beam_xy_x
    - imgCIF:_diffrn_detector.beam_centre_x
    - mmCIF:_diffrn_detector.beam_center_x
    - ispyb:DataCollection.xBeam
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  beam_center_y:
    name: beam_center_y
    description: Beam center Y coordinate, typically specified in pixels ([px]). Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Beam_xy_y
    - imgCIF:_diffrn_detector.beam_centre_y
    - mmCIF:_diffrn_detector.beam_center_y
    - ispyb:DataCollection.yBeam
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  detector_distance:
    name: detector_distance
    description: Distance from sample to detector, typically specified in millimeters
      (mm). Data providers may specify alternative units by including the unit in
      the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Detector_distance
    - imgCIF:_diffrn_measurement.sample_detector_distance
    - mmCIF:_diffrn_detector.distance
    - ispyb:DataCollection.detectorDistance
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  pixel_size_x:
    name: pixel_size_x
    description: Pixel size X dimension, typically specified in micrometers (µm).
      Data providers may specify alternative units (e.g., Angstroms) by including
      the unit in the QuantityValue.
    comments:
    - 'imgCIF: _array_element_size.size[1]'
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Pixel_size_x
    - imgCIF:_array_element_size.size
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  pixel_size_y:
    name: pixel_size_y
    description: Pixel size Y dimension, typically specified in micrometers (µm).
      Data providers may specify alternative units (e.g., Angstroms) by including
      the unit in the QuantityValue.
    comments:
    - 'imgCIF: _array_element_size.size[2]'
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Pixel_size_y
    - imgCIF:_array_element_size.size
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  total_rotation:
    name: total_rotation
    description: Total rotation range collected, typically specified in degrees. Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Total_rotation_deg
    - imgCIF:_diffrn_scan_axis.angle_range
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  beamline:
    name: beamline
    description: Beamline identifier (e.g., FMX, AMX, 12.3.1)
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Beamline
    - mmCIF:_diffrn_source.pdbx_synchrotron_beamline
    - ispyb:BLSession.beamLineName
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  transmission:
    name: transmission
    description: X-ray beam transmission as a percentage (0-100). Data providers may
      specify as a decimal fraction or percentage by including the unit in the QuantityValue.
    comments:
    - Percentage of full beam intensity used
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.transmission
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  flux:
    name: flux
    description: Photon flux at sample position, typically specified in photons per
      second. Data providers may specify alternative units by including the unit in
      the QuantityValue.
    comments:
    - Measured or calculated photon flux
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.flux
    rank: 1000
    domain_of:
    - ExperimentRun
    - XRFImage
    range: QuantityValue
    inlined: true
  flux_end:
    name: flux_end
    description: Photon flux at end of data collection, typically specified in photons
      per second. Data providers may specify alternative units by including the unit
      in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.flux_end
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  slit_gap_horizontal:
    name: slit_gap_horizontal
    description: Horizontal slit gap aperture, typically specified in micrometers
      (µm). Data providers may specify alternative units by including the unit in
      the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.slitGapHorizontal
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  slit_gap_vertical:
    name: slit_gap_vertical
    description: Vertical slit gap aperture, typically specified in micrometers (µm).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.slitGapVertical
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  undulator_gap:
    name: undulator_gap
    description: Undulator gap setting, typically specified in millimeters (mm). Data
      providers may specify alternative units by including the unit in the QuantityValue.
      Primary undulator gap for beamlines with insertion devices.
    comments:
    - Primary undulator gap for beamlines with insertion devices
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.undulatorGap1
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  synchrotron_mode:
    name: synchrotron_mode
    description: Synchrotron storage ring fill mode
    comments:
    - e.g., 'Top-up', 'Decay', 'Hybrid'
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.synchrotronMode
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  exposure_time:
    name: exposure_time
    description: Exposure time per image, typically specified in seconds (s). Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.exposureTime
    rank: 1000
    domain_of:
    - ExperimentRun
    - Image
    - ExperimentalConditions
    range: QuantityValue
    inlined: true
  start_time:
    name: start_time
    description: Data collection start timestamp
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.startTime
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  end_time:
    name: end_time
    description: Data collection end timestamp
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.endTime
    rank: 1000
    domain_of:
    - ExperimentRun
    range: string
  resolution:
    name: resolution
    description: Resolution at edge of detector, typically specified in Angstroms
      (Å). Data providers may specify alternative units by including the unit in the
      QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.resolution
    rank: 1000
    domain_of:
    - ExperimentRun
    - QualityMetrics
    range: QuantityValue
    inlined: true
  resolution_at_corner:
    name: resolution_at_corner
    description: Resolution at corner of detector, typically specified in Angstroms
      (Å). Data providers may specify alternative units by including the unit in the
      QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.resolutionAtCorner
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  ispyb_data_collection_id:
    name: ispyb_data_collection_id
    description: ISPyB DataCollection.dataCollectionId for traceability
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  ispyb_session_id:
    name: ispyb_session_id
    description: ISPyB BLSession.sessionId
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true

name: ExperimentRun
description: An experimental data collection session
from_schema: https://w3id.org/lambda-ber-schema/
is_a: NamedThing
attributes:
  experiment_code:
    name: experiment_code
    description: Human-friendly laboratory or facility identifier for the experiment
      (e.g., 'SIBYLS-2024-02-01-hetBGL', 'CRYOEM-RUN-240815-001'). Used for local
      tracking and cross-referencing within laboratory systems.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: experiment_code
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
    required: true
  experiment_date:
    name: experiment_date
    description: Date of the experiment
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: experiment_date
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  operator_id:
    name: operator_id
    description: Identifier or name of the person who performed the experiment data
      collection (e.g., 'jsmith', 'John Smith', or personnel ID)
    from_schema: https://w3id.org/lambda-ber-schema/
    alias: operator_id
    owner: ExperimentRun
    domain_of:
    - SamplePreparation
    - ExperimentRun
    range: string
  technique:
    name: technique
    description: Technique used for data collection
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: technique
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: TechniqueEnum
    required: true
  experimental_method:
    name: experimental_method
    description: Specific experimental method for structure determination (particularly
      for diffraction techniques)
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: experimental_method
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    - BiophysicalProperty
    range: ExperimentalMethodEnum
  experimental_conditions:
    name: experimental_conditions
    description: Environmental and experimental conditions
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: experimental_conditions
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: ExperimentalConditions
  data_collection_strategy:
    name: data_collection_strategy
    description: Strategy for data collection
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: data_collection_strategy
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: DataCollectionStrategy
  quality_metrics:
    name: quality_metrics
    description: Quality metrics for the experiment
    from_schema: https://w3id.org/lambda-ber-schema/
    alias: quality_metrics
    owner: ExperimentRun
    domain_of:
    - Sample
    - ExperimentRun
    range: QualityMetrics
  raw_data_location:
    name: raw_data_location
    description: Location of raw data files
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: raw_data_location
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  processing_status:
    name: processing_status
    description: Current processing status
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: processing_status
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: ProcessingStatusEnum
  daq_system:
    name: daq_system
    description: Data acquisition system used to collect this experiment
    from_schema: https://w3id.org/lambda-ber-schema/
    alias: daq_system
    owner: ExperimentRun
    domain_of:
    - BeamlineInstrument
    - ExperimentRun
    range: DataAcquisitionSystemEnum
  magnification:
    name: magnification
    description: Magnification used during data collection
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: magnification
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    - OpticalImage
    range: QuantityValue
    inlined: true
  calibrated_pixel_size:
    name: calibrated_pixel_size
    description: Calibrated pixel size in Angstroms per pixel
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: calibrated_pixel_size
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  camera_binning:
    name: camera_binning
    description: Camera binning factor. This must be a positive float value (e.g.,
      1, 1.5, 2, 3).
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: camera_binning
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  exposure_time_per_frame:
    name: exposure_time_per_frame
    description: Exposure time per frame in milliseconds
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: exposure_time_per_frame
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  frames_per_movie:
    name: frames_per_movie
    description: Number of frames per movie
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: frames_per_movie
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  total_exposure_time:
    name: total_exposure_time
    description: Total exposure time in milliseconds
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: total_exposure_time
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  total_dose:
    name: total_dose
    description: Total electron dose in e-/Angstrom^2
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: total_dose
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    - DataCollectionStrategy
    range: QuantityValue
    inlined: true
  dose_rate:
    name: dose_rate
    description: Dose rate in e-/pixel/s or e-/Angstrom^2/s
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: dose_rate
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_target:
    name: defocus_target
    description: Target defocus value in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: defocus_target
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_range_min:
    name: defocus_range_min
    description: Minimum defocus range in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: defocus_range_min
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_range_max:
    name: defocus_range_max
    description: Maximum defocus range in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: defocus_range_max
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  defocus_range_increment:
    name: defocus_range_increment
    description: Defocus range increment in micrometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: defocus_range_increment
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  astigmatism_target:
    name: astigmatism_target
    description: Target astigmatism in Angstroms
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: astigmatism_target
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  coma:
    name: coma
    description: Coma aberration in nanometers
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: coma
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  stage_tilt:
    name: stage_tilt
    description: Stage tilt angle in degrees
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: stage_tilt
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  autoloader_slot:
    name: autoloader_slot
    description: Autoloader slot identifier
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: autoloader_slot
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  shots_per_hole:
    name: shots_per_hole
    description: Number of shots taken per hole
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: shots_per_hole
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  holes_per_group:
    name: holes_per_group
    description: Number of holes per group. Data providers may include unit information
      in the QuantityValue if needed.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: holes_per_group
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  acquisition_software:
    name: acquisition_software
    description: Acquisition software used (e.g., SerialEM, EPU, Leginon)
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: acquisition_software
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  acquisition_software_version:
    name: acquisition_software_version
    description: Version of acquisition software
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: acquisition_software_version
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  wavelength:
    name: wavelength
    description: X-ray wavelength, typically specified in Angstroms (Å). Data providers
      may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Wavelength
    - imgCIF:_diffrn_radiation_wavelength.wavelength
    - mmCIF:_diffrn_radiation_wavelength.wavelength
    - ispyb:DataCollection.wavelength
    rank: 1000
    alias: wavelength
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  oscillation_angle:
    name: oscillation_angle
    description: Oscillation angle per image, typically specified in degrees. Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Angle_increment
    - imgCIF:_diffrn_scan_axis.angle_increment
    - mmCIF:_diffrn_scan.angle_increment
    - ispyb:DataCollection.axisRange
    rank: 1000
    alias: oscillation_angle
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  start_angle:
    name: start_angle
    description: Starting rotation angle, typically specified in degrees. Data providers
      may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Start_angle
    - imgCIF:_diffrn_scan_axis.angle_start
    - ispyb:DataCollection.axisStart
    rank: 1000
    alias: start_angle
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  number_of_images:
    name: number_of_images
    description: Total number of diffraction images collected
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: number_of_images
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  beam_center_x:
    name: beam_center_x
    description: Beam center X coordinate, typically specified in pixels ([px]). Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Beam_xy_x
    - imgCIF:_diffrn_detector.beam_centre_x
    - mmCIF:_diffrn_detector.beam_center_x
    - ispyb:DataCollection.xBeam
    rank: 1000
    alias: beam_center_x
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  beam_center_y:
    name: beam_center_y
    description: Beam center Y coordinate, typically specified in pixels ([px]). Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Beam_xy_y
    - imgCIF:_diffrn_detector.beam_centre_y
    - mmCIF:_diffrn_detector.beam_center_y
    - ispyb:DataCollection.yBeam
    rank: 1000
    alias: beam_center_y
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  detector_distance:
    name: detector_distance
    description: Distance from sample to detector, typically specified in millimeters
      (mm). Data providers may specify alternative units by including the unit in
      the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Detector_distance
    - imgCIF:_diffrn_measurement.sample_detector_distance
    - mmCIF:_diffrn_detector.distance
    - ispyb:DataCollection.detectorDistance
    rank: 1000
    alias: detector_distance
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  pixel_size_x:
    name: pixel_size_x
    description: Pixel size X dimension, typically specified in micrometers (µm).
      Data providers may specify alternative units (e.g., Angstroms) by including
      the unit in the QuantityValue.
    comments:
    - 'imgCIF: _array_element_size.size[1]'
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Pixel_size_x
    - imgCIF:_array_element_size.size
    rank: 1000
    alias: pixel_size_x
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  pixel_size_y:
    name: pixel_size_y
    description: Pixel size Y dimension, typically specified in micrometers (µm).
      Data providers may specify alternative units (e.g., Angstroms) by including
      the unit in the QuantityValue.
    comments:
    - 'imgCIF: _array_element_size.size[2]'
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Pixel_size_y
    - imgCIF:_array_element_size.size
    rank: 1000
    alias: pixel_size_y
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  total_rotation:
    name: total_rotation
    description: Total rotation range collected, typically specified in degrees. Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Total_rotation_deg
    - imgCIF:_diffrn_scan_axis.angle_range
    rank: 1000
    alias: total_rotation
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  beamline:
    name: beamline
    description: Beamline identifier (e.g., FMX, AMX, 12.3.1)
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - nsls2:Beamline
    - mmCIF:_diffrn_source.pdbx_synchrotron_beamline
    - ispyb:BLSession.beamLineName
    rank: 1000
    alias: beamline
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  transmission:
    name: transmission
    description: X-ray beam transmission as a percentage (0-100). Data providers may
      specify as a decimal fraction or percentage by including the unit in the QuantityValue.
    comments:
    - Percentage of full beam intensity used
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.transmission
    rank: 1000
    alias: transmission
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  flux:
    name: flux
    description: Photon flux at sample position, typically specified in photons per
      second. Data providers may specify alternative units by including the unit in
      the QuantityValue.
    comments:
    - Measured or calculated photon flux
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.flux
    rank: 1000
    alias: flux
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    - XRFImage
    range: QuantityValue
    inlined: true
  flux_end:
    name: flux_end
    description: Photon flux at end of data collection, typically specified in photons
      per second. Data providers may specify alternative units by including the unit
      in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.flux_end
    rank: 1000
    alias: flux_end
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  slit_gap_horizontal:
    name: slit_gap_horizontal
    description: Horizontal slit gap aperture, typically specified in micrometers
      (µm). Data providers may specify alternative units by including the unit in
      the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.slitGapHorizontal
    rank: 1000
    alias: slit_gap_horizontal
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  slit_gap_vertical:
    name: slit_gap_vertical
    description: Vertical slit gap aperture, typically specified in micrometers (µm).
      Data providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.slitGapVertical
    rank: 1000
    alias: slit_gap_vertical
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  undulator_gap:
    name: undulator_gap
    description: Undulator gap setting, typically specified in millimeters (mm). Data
      providers may specify alternative units by including the unit in the QuantityValue.
      Primary undulator gap for beamlines with insertion devices.
    comments:
    - Primary undulator gap for beamlines with insertion devices
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.undulatorGap1
    rank: 1000
    alias: undulator_gap
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  synchrotron_mode:
    name: synchrotron_mode
    description: Synchrotron storage ring fill mode
    comments:
    - e.g., 'Top-up', 'Decay', 'Hybrid'
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.synchrotronMode
    rank: 1000
    alias: synchrotron_mode
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  exposure_time:
    name: exposure_time
    description: Exposure time per image, typically specified in seconds (s). Data
      providers may specify alternative units by including the unit in the QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.exposureTime
    rank: 1000
    alias: exposure_time
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    - Image
    - ExperimentalConditions
    range: QuantityValue
    inlined: true
  start_time:
    name: start_time
    description: Data collection start timestamp
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.startTime
    rank: 1000
    alias: start_time
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  end_time:
    name: end_time
    description: Data collection end timestamp
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.endTime
    rank: 1000
    alias: end_time
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: string
  resolution:
    name: resolution
    description: Resolution at edge of detector, typically specified in Angstroms
      (Å). Data providers may specify alternative units by including the unit in the
      QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.resolution
    rank: 1000
    alias: resolution
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    - QualityMetrics
    range: QuantityValue
    inlined: true
  resolution_at_corner:
    name: resolution_at_corner
    description: Resolution at corner of detector, typically specified in Angstroms
      (Å). Data providers may specify alternative units by including the unit in the
      QuantityValue.
    from_schema: https://w3id.org/lambda-ber-schema/
    exact_mappings:
    - ispyb:DataCollection.resolutionAtCorner
    rank: 1000
    alias: resolution_at_corner
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  ispyb_data_collection_id:
    name: ispyb_data_collection_id
    description: ISPyB DataCollection.dataCollectionId for traceability
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: ispyb_data_collection_id
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  ispyb_session_id:
    name: ispyb_session_id
    description: ISPyB BLSession.sessionId
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: ispyb_session_id
    owner: ExperimentRun
    domain_of:
    - ExperimentRun
    range: QuantityValue
    inlined: true
  id:
    name: id
    description: Globally unique identifier as an IRI or CURIE for machine processing
      and external references. Used for linking data across systems and semantic web
      integration.
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    identifier: true
    alias: id
    owner: ExperimentRun
    domain_of:
    - NamedThing
    - Attribute
    range: uriorcurie
    required: true
  title:
    name: title
    description: A human-readable name or title for this entity
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    slot_uri: dcterms:title
    alias: title
    owner: ExperimentRun
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A detailed textual description of this entity
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: description
    owner: ExperimentRun
    domain_of:
    - NamedThing
    - AttributeGroup
    range: string