Enum: StructuralFeatureTypeEnum

Types of structural features

URI: lambdaber:StructuralFeatureTypeEnum

Permissible Values

Value	Meaning	Description
alpha_helix	None	Alpha helix
beta_sheet	None	Beta sheet
beta_strand	None	Beta strand
turn	None	Turn structure
coil	None	Random coil
disordered_region	None	Intrinsically disordered region
transmembrane_helix	None	Transmembrane helix
signal_peptide	None	Signal peptide
transit_peptide	None	Transit peptide
domain	None	Protein domain
repeat	None	Sequence repeat
zinc_finger	None	Zinc finger motif
zinc_binding	None	Zinc binding site
coiled_coil	None	Coiled coil
motif	None	Structural motif
cavity	None	Structural cavity
channel	None	Molecular channel
pore	None	Molecular pore
hinge	None	Hinge region
linker	None	Linker region

Slots

Name	Description
feature_type	Type of structural feature

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/lambda-ber-schema/

LinkML Source

name: StructuralFeatureTypeEnum
description: Types of structural features
from_schema: https://w3id.org/lambda-ber-schema/
rank: 1000
permissible_values:
  alpha_helix:
    text: alpha_helix
    description: Alpha helix
  beta_sheet:
    text: beta_sheet
    description: Beta sheet
  beta_strand:
    text: beta_strand
    description: Beta strand
  turn:
    text: turn
    description: Turn structure
  coil:
    text: coil
    description: Random coil
  disordered_region:
    text: disordered_region
    description: Intrinsically disordered region
  transmembrane_helix:
    text: transmembrane_helix
    description: Transmembrane helix
  signal_peptide:
    text: signal_peptide
    description: Signal peptide
  transit_peptide:
    text: transit_peptide
    description: Transit peptide
  domain:
    text: domain
    description: Protein domain
  repeat:
    text: repeat
    description: Sequence repeat
  zinc_finger:
    text: zinc_finger
    description: Zinc finger motif
  zinc_binding:
    text: zinc_binding
    description: Zinc binding site
  coiled_coil:
    text: coiled_coil
    description: Coiled coil
  motif:
    text: motif
    description: Structural motif
  cavity:
    text: cavity
    description: Structural cavity
  channel:
    text: channel
    description: Molecular channel
  pore:
    text: pore
    description: Molecular pore
  hinge:
    text: hinge
    description: Hinge region
  linker:
    text: linker
    description: Linker region