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Class: MolecularComposition

Molecular composition of a sample

URI: lambdaber:MolecularComposition

classDiagram class MolecularComposition click MolecularComposition href "../MolecularComposition/" AttributeGroup <|-- MolecularComposition click AttributeGroup href "../AttributeGroup/" MolecularComposition : description MolecularComposition : ligands MolecularComposition : modifications MolecularComposition : sequences

Inheritance

Slots

Name Cardinality and Range Description Inheritance
sequences *
String		 Amino acid or nucleotide sequences direct
modifications *
String		 Post-translational modifications or chemical modifications direct
ligands *
String		 Bound ligands or cofactors direct
description 0..1
String		 AttributeGroup

Usages

used by used in type used
Sample molecular_composition range MolecularComposition

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/lambda-ber-schema/

Mappings

Mapping Type Mapped Value
self lambdaber:MolecularComposition
native lambdaber:MolecularComposition

LinkML Source

Direct

name: MolecularComposition
description: Molecular composition of a sample
from_schema: https://w3id.org/lambda-ber-schema/
is_a: AttributeGroup
attributes:
  sequences:
    name: sequences
    description: Amino acid or nucleotide sequences
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - MolecularComposition
    range: string
    multivalued: true
  modifications:
    name: modifications
    description: Post-translational modifications or chemical modifications
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - MolecularComposition
    range: string
    multivalued: true
  ligands:
    name: ligands
    description: Bound ligands or cofactors
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    domain_of:
    - MolecularComposition
    range: string
    multivalued: true

Induced

name: MolecularComposition
description: Molecular composition of a sample
from_schema: https://w3id.org/lambda-ber-schema/
is_a: AttributeGroup
attributes:
  sequences:
    name: sequences
    description: Amino acid or nucleotide sequences
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: sequences
    owner: MolecularComposition
    domain_of:
    - MolecularComposition
    range: string
    multivalued: true
  modifications:
    name: modifications
    description: Post-translational modifications or chemical modifications
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: modifications
    owner: MolecularComposition
    domain_of:
    - MolecularComposition
    range: string
    multivalued: true
  ligands:
    name: ligands
    description: Bound ligands or cofactors
    from_schema: https://w3id.org/lambda-ber-schema/
    rank: 1000
    alias: ligands
    owner: MolecularComposition
    domain_of:
    - MolecularComposition
    range: string
    multivalued: true
  description:
    name: description
    from_schema: https://w3id.org/lambda-ber-schema/
    alias: description
    owner: MolecularComposition
    domain_of:
    - NamedThing
    - AttributeGroup
    range: string