Enum: FunctionalSiteTypeEnum

Types of functional sites in proteins

Permissible Values

Value	Meaning	Description
active_site	None	Enzyme active site
catalytic_site	None	Catalytic residues
binding_site	None	General binding site
allosteric_site	None	Allosteric regulation site
substrate_binding	None	Substrate binding site
cofactor_binding	None	Cofactor binding site
inhibitor_binding	None	Inhibitor binding site
metal_binding	None	Metal ion binding site
nucleotide_binding	None	Nucleotide binding site
phosphorylation_site	None	Phosphorylation site
glycosylation_site	None	Glycosylation site
ubiquitination_site	None	Ubiquitination site
sumoylation_site	None	SUMOylation site
acetylation_site	None	Acetylation site
methylation_site	None	Methylation site
protein_binding	None	Protein-protein interaction site
dna_binding	None	DNA binding site
rna_binding	None	RNA binding site
lipid_binding	None	Lipid binding site

Slots

Name	Description
site_type	Type of functional site

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/lambda-ber-schema/

LinkML Source

name: FunctionalSiteTypeEnum
description: Types of functional sites in proteins
from_schema: https://w3id.org/lambda-ber-schema/
rank: 1000
permissible_values:
  active_site:
    text: active_site
    description: Enzyme active site
  catalytic_site:
    text: catalytic_site
    description: Catalytic residues
  binding_site:
    text: binding_site
    description: General binding site
  allosteric_site:
    text: allosteric_site
    description: Allosteric regulation site
  substrate_binding:
    text: substrate_binding
    description: Substrate binding site
  cofactor_binding:
    text: cofactor_binding
    description: Cofactor binding site
  inhibitor_binding:
    text: inhibitor_binding
    description: Inhibitor binding site
  metal_binding:
    text: metal_binding
    description: Metal ion binding site
  nucleotide_binding:
    text: nucleotide_binding
    description: Nucleotide binding site
  phosphorylation_site:
    text: phosphorylation_site
    description: Phosphorylation site
  glycosylation_site:
    text: glycosylation_site
    description: Glycosylation site
  ubiquitination_site:
    text: ubiquitination_site
    description: Ubiquitination site
  sumoylation_site:
    text: sumoylation_site
    description: SUMOylation site
  acetylation_site:
    text: acetylation_site
    description: Acetylation site
  methylation_site:
    text: methylation_site
    description: Methylation site
  protein_binding:
    text: protein_binding
    description: Protein-protein interaction site
  dna_binding:
    text: dna_binding
    description: DNA binding site
  rna_binding:
    text: rna_binding
    description: RNA binding site
  lipid_binding:
    text: lipid_binding
    description: Lipid binding site