Enum: AnnotationSourceEnum

Sources of functional annotations

Permissible Values

Value	Meaning	Description
pdbe	None	PDBe
pdbe_kb	None	PDBe-KB
uniprot	None	UniProt
pfam	None	Pfam
cath	None	CATH
scop	None	SCOP
interpro	None	InterPro
channelsdb	None	ChannelsDB
dynamine	None	DynaMine
foldx	None	FoldX
p2rank	None	P2rank
3dligandsite	None	3D-LigandSite
arpeggio	None	Arpeggio
covalentizer	None	Covalentizer
depth	None	DEPTH
elmpdb	None	ELM-PDB
frustration	None	Frustration
kincore	None	KinCore
membranome	None	Membranome
missense3d	None	Missense3D
mobi	None	MobiDB
nucleos	None	Nucleos
14_3_3_pred	None	14-3-3-Pred
akid	None	AKID
camkinet	None	CamKiNet
cansar	None	canSAR
credo	None	CREDO
klifs	None	KLIFS
m_csm	None	mCSM
moondb	None	MoonDB
pocketome	None	Pocketome
propka	None	PROPKA
proteins_api	None	Proteins API
validation	None	Validation
alphafold	None	AlphaFold
modbase	None	ModBase
swiss_model	None	SWISS-MODEL
intact	None	IntAct
cosmic	None	COSMIC
clinvar	None	ClinVar

Slots

Name	Description
source_database	Source database or resource that provided this annotation

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/lambda-ber-schema/

LinkML Source

name: AnnotationSourceEnum
description: Sources of functional annotations
from_schema: https://w3id.org/lambda-ber-schema/
rank: 1000
permissible_values:
  pdbe:
    text: pdbe
    description: PDBe
  pdbe_kb:
    text: pdbe_kb
    description: PDBe-KB
  uniprot:
    text: uniprot
    description: UniProt
  pfam:
    text: pfam
    description: Pfam
  cath:
    text: cath
    description: CATH
  scop:
    text: scop
    description: SCOP
  interpro:
    text: interpro
    description: InterPro
  channelsdb:
    text: channelsdb
    description: ChannelsDB
  dynamine:
    text: dynamine
    description: DynaMine
  foldx:
    text: foldx
    description: FoldX
  p2rank:
    text: p2rank
    description: P2rank
  3dligandsite:
    text: 3dligandsite
    description: 3D-LigandSite
  arpeggio:
    text: arpeggio
    description: Arpeggio
  covalentizer:
    text: covalentizer
    description: Covalentizer
  depth:
    text: depth
    description: DEPTH
  elmpdb:
    text: elmpdb
    description: ELM-PDB
  frustration:
    text: frustration
    description: Frustration
  kincore:
    text: kincore
    description: KinCore
  membranome:
    text: membranome
    description: Membranome
  missense3d:
    text: missense3d
    description: Missense3D
  mobi:
    text: mobi
    description: MobiDB
  nucleos:
    text: nucleos
    description: Nucleos
  14_3_3_pred:
    text: 14_3_3_pred
    description: 14-3-3-Pred
  akid:
    text: akid
    description: AKID
  camkinet:
    text: camkinet
    description: CamKiNet
  cansar:
    text: cansar
    description: canSAR
  credo:
    text: credo
    description: CREDO
  klifs:
    text: klifs
    description: KLIFS
  m_csm:
    text: m_csm
    description: mCSM
  moondb:
    text: moondb
    description: MoonDB
  pocketome:
    text: pocketome
    description: Pocketome
  propka:
    text: propka
    description: PROPKA
  proteins_api:
    text: proteins_api
    description: Proteins API
  validation:
    text: validation
    description: Validation
  alphafold:
    text: alphafold
    description: AlphaFold
  modbase:
    text: modbase
    description: ModBase
  swiss_model:
    text: swiss_model
    description: SWISS-MODEL
  intact:
    text: intact
    description: IntAct
  cosmic:
    text: cosmic
    description: COSMIC
  clinvar:
    text: clinvar
    description: ClinVar